Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Gm12030-201ENSMUST00000121917 223 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Gm23218-201ENSMUST00000158124 276 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.28□□□□□ -0.44
Rd3Q8BRE0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rd3Q8BRE0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Gm14807-201ENSMUST00000116640 983 ntBASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Gm15329-201ENSMUST00000121408 155 ntBASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Gm42816-201ENSMUST00000198433 325 ntBASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Gm18059-201ENSMUST00000208073 580 ntBASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Gm5468-202ENSMUST00000227851 682 ntBASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rd3Q8BRE0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm14892-201ENSMUST00000117636 267 ntBASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm15549-201ENSMUST00000121595 622 ntBASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm26134-201ENSMUST00000178484 110 ntBASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm17825-201ENSMUST00000206836 794 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms