Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm8019-201ENSMUST00000119317 587 ntBASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Gm16305-201ENSMUST00000140747 556 ntBASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Gm18733-202ENSMUST00000174447 401 ntBASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 AC121567.1-201ENSMUST00000227213 842 ntBASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Prss23os-202ENSMUST00000179361 1362 ntBASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm12337-201ENSMUST00000119634 400 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm11952-201ENSMUST00000121172 821 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 CT025603.1-201ENSMUST00000224040 448 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm44755-201ENSMUST00000207830 2102 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm20493-201ENSMUST00000173706 213 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm7572-201ENSMUST00000182616 766 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm6518-201ENSMUST00000208450 342 ntBASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col16a1Q8BLX7 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 AC137950.2-202ENSMUST00000227150 1635 ntBASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Gm23439-201ENSMUST00000104292 132 ntBASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Gm6612-201ENSMUST00000170777 395 ntBASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Snord55-201ENSMUST00000174939 79 ntBASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Mir6387-201ENSMUST00000184042 108 ntBASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col16a1Q8BLX7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms