Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gm25343-201ENSMUST00000157460 107 ntBASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gm22662-201ENSMUST00000175290 256 ntBASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gm21631-201ENSMUST00000195041 754 ntBASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Elobl-202ENSMUST00000082339 300 ntBASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 AC164614.1-201ENSMUST00000216038 397 ntBASIC9.49□□□□□ -0.89
Smg1Q8BKX6 AC102847.1-202ENSMUST00000226313 1245 ntBASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm5278-201ENSMUST00000055957 552 ntBASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm13456-201ENSMUST00000118928 1365 ntBASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm8302-201ENSMUST00000119217 852 ntBASIC9.49□□□□□ -0.89
Smg1Q8BKX6 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm6291-201ENSMUST00000179994 309 ntBASIC9.49□□□□□ -0.89
Smg1Q8BKX6 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm5205-201ENSMUST00000182253 1003 ntBASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smg1Q8BKX6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Gm8725-201ENSMUST00000221829 1333 ntBASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smg1Q8BKX6 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms