Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp1Q8BJQ2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Gm16166-201ENSMUST00000118291 787 ntBASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Gm28388-201ENSMUST00000186262 437 ntBASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Olfr584-201ENSMUST00000098210 964 ntBASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Usp1Q8BJQ2 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm23272-201ENSMUST00000104053 129 ntBASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm11675-201ENSMUST00000121873 832 ntBASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm8459-201ENSMUST00000162504 760 ntBASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm37028-201ENSMUST00000194276 107 ntBASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm8342-201ENSMUST00000209839 757 ntBASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms