Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Gm23272-201ENSMUST00000104053 129 ntBASIC11.1□□□□□ -0.63
Vrk1Q80X41 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Gm10807-201ENSMUST00000177134 795 ntBASIC11.1□□□□□ -0.63
Vrk1Q80X41 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.1□□□□□ -0.63
Vrk1Q80X41 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.1□□□□□ -0.63
Vrk1Q80X41 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Gm23680-201ENSMUST00000083162 164 ntBASIC11.1□□□□□ -0.63
Vrk1Q80X41 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.1□□□□□ -0.63
Vrk1Q80X41 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Vrk1Q80X41 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm25880-201ENSMUST00000104331 132 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm11340-201ENSMUST00000119226 412 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm12036-201ENSMUST00000120008 530 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.09□□□□□ -0.63
Vrk1Q80X41 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vrk1Q80X41 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Vrk1Q80X41 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Vrk1Q80X41 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms