Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gm12036-201ENSMUST00000120008 530 ntBASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gm11836-201ENSMUST00000121022 441 ntBASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh8Q7TSK3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh8Q7TSK3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh8Q7TSK3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh8Q7TSK3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh8Q7TSK3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh8Q7TSK3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh8Q7TSK3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pcdh8Q7TSK3 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh8Q7TSK3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm3150-201ENSMUST00000166418 204 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm12407-201ENSMUST00000180219 324 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm28937-201ENSMUST00000185413 695 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm29400-201ENSMUST00000187208 695 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm28662-201ENSMUST00000188446 695 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm28251-201ENSMUST00000188835 695 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm37318-201ENSMUST00000194325 695 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm38017-201ENSMUST00000194768 695 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm38151-201ENSMUST00000195085 289 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm37287-201ENSMUST00000195449 695 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm37793-201ENSMUST00000195548 695 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm7940-201ENSMUST00000218195 769 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Snora73b-201ENSMUST00000083419 205 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh8Q7TSK3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms