Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Gm28581-201ENSMUST00000186086 2177 ntBASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Gm44798-201ENSMUST00000208123 2410 ntBASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Gm45930-201ENSMUST00000221330 292 ntBASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf220Q6PDX6 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf220Q6PDX6 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Gm11478-201ENSMUST00000117851 599 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Gm11597-201ENSMUST00000121423 964 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Gm23119-201ENSMUST00000158610 140 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Gm9022-201ENSMUST00000182482 992 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Gm19324-201ENSMUST00000213229 1169 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms