Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm6158-201ENSMUST00000109467 904 ntBASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Gm6758-201ENSMUST00000119643 1055 ntBASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 BC106175-202ENSMUST00000219344 1213 ntBASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Gm5178-201ENSMUST00000219380 898 ntBASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd4Q6PDQ2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 AC164556.1-201ENSMUST00000221318 751 ntBASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd4Q6PDQ2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gm9372-201ENSMUST00000168454 430 ntBASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gm7880-201ENSMUST00000203748 871 ntBASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gm44740-201ENSMUST00000205603 1614 ntBASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gm5529-201ENSMUST00000165691 891 ntBASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gm19640-201ENSMUST00000214849 464 ntBASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 n-R5s71-201ENSMUST00000093668 119 ntBASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd4Q6PDQ2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Chd4Q6PDQ2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chd4Q6PDQ2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chd4Q6PDQ2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Chd4Q6PDQ2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 AC090962.2-201ENSMUST00000225064 1801 ntBASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd4Q6PDQ2 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms