Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Mir1249-201ENSMUST00000116791 98 ntBASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Gm16209-201ENSMUST00000118457 627 ntBASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Gm10171-201ENSMUST00000126220 628 ntBASIC17.56■□□□□ 0.4
Slx4Q6P1D7 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Gm26119-201ENSMUST00000175601 104 ntBASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 AC187103.3-201ENSMUST00000225725 646 ntBASIC17.56■□□□□ 0.4
Slx4Q6P1D7 AC158986.2-201ENSMUST00000227487 618 ntBASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Gm10233-201ENSMUST00000089275 628 ntBASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Cd9-ps-201ENSMUST00000174687 650 ntBASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Gm4753-201ENSMUST00000188327 1255 ntBASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Gm37723-201ENSMUST00000194480 565 ntBASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Ighv1-86-201ENSMUST00000200562 353 ntBASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Gm42689-201ENSMUST00000202403 404 ntBASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slx4Q6P1D7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Gm7104-201ENSMUST00000179741 2532 ntBASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Gm15815-201ENSMUST00000120569 255 ntBASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Gm26174-201ENSMUST00000158415 219 ntBASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Gm43102-201ENSMUST00000201004 2324 ntBASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 AC166361.2-201ENSMUST00000219269 1415 ntBASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slx4Q6P1D7 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Gm11952-201ENSMUST00000121172 821 ntBASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Gm7445-201ENSMUST00000192115 340 ntBASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Gm43002-201ENSMUST00000200310 155 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms