Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Scn9aQ62205 AC154407.1-201ENSMUST00000226777 526 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 AC166361.2-201ENSMUST00000219269 1415 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm19246-201ENSMUST00000173599 255 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm7765-201ENSMUST00000182585 974 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm18014-201ENSMUST00000183369 817 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm9644-201ENSMUST00000212828 1183 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.41□□□□□ -0.26
Scn9aQ62205 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Gm22495-201ENSMUST00000104492 126 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Mir1249-201ENSMUST00000116791 98 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.4□□□□□ -0.26
Scn9aQ62205 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Gm16165-201ENSMUST00000160140 795 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Cd9-ps-201ENSMUST00000174687 650 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Gm6216-201ENSMUST00000182390 687 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Mir6387-201ENSMUST00000184042 108 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Ighv1-70-201ENSMUST00000196509 351 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Scn9aQ62205 AC121567.1-201ENSMUST00000227213 842 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.4□□□□□ -0.26
Scn9aQ62205 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn9aQ62205 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Scn9aQ62205 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Scn9aQ62205 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Scn9aQ62205 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
Scn9aQ62205 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC13.4□□□□□ -0.27
Scn9aQ62205 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC13.4□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms