Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm12240-201ENSMUST00000120178 229 ntBASIC10.54□□□□□ -0.72
VcanQ62059 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VcanQ62059 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VcanQ62059 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.54□□□□□ -0.72
VcanQ62059 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Gm12499-201ENSMUST00000121961 546 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Gm6939-201ENSMUST00000122029 864 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Gm9771-201ENSMUST00000198267 1137 ntBASIC10.54□□□□□ -0.72
VcanQ62059 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC10.54□□□□□ -0.72
VcanQ62059 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VcanQ62059 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.53□□□□□ -0.72
VcanQ62059 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VcanQ62059 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.53□□□□□ -0.72
VcanQ62059 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.53□□□□□ -0.72
VcanQ62059 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VcanQ62059 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VcanQ62059 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC10.53□□□□□ -0.72
VcanQ62059 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC10.53□□□□□ -0.72
VcanQ62059 Mir6396-201ENSMUST00000183603 111 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Gm28671-201ENSMUST00000187036 692 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Ighv1-8-201ENSMUST00000192236 293 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Gm5845-201ENSMUST00000195812 796 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Gm9409-201ENSMUST00000197017 316 ntBASIC10.53□□□□□ -0.72
VcanQ62059 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC10.53□□□□□ -0.72
VcanQ62059 AC123698.1-201ENSMUST00000227090 402 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VcanQ62059 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.53□□□□□ -0.72
VcanQ62059 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Gm24066-201ENSMUST00000104515 131 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Gm16480-201ENSMUST00000120439 832 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.53□□□□□ -0.72
VcanQ62059 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
VcanQ62059 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
VcanQ62059 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VcanQ62059 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.53□□□□□ -0.72
VcanQ62059 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.72
VcanQ62059 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC10.52□□□□□ -0.72
VcanQ62059 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Gm37819-201ENSMUST00000194626 1065 ntBASIC10.52□□□□□ -0.72
VcanQ62059 Gm44498-201ENSMUST00000199509 111 ntBASIC10.52□□□□□ -0.72
VcanQ62059 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.52□□□□□ -0.72
VcanQ62059 AC140314.1-201ENSMUST00000219549 554 ntBASIC10.52□□□□□ -0.72
VcanQ62059 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms