Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Gm5982-201ENSMUST00000196234 512 ntBASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Gm17831-201ENSMUST00000205579 900 ntBASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfaip3Q60769 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm15352-201ENSMUST00000118696 270 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm11700-201ENSMUST00000119409 403 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm3150-201ENSMUST00000166418 204 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm10807-201ENSMUST00000177134 795 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm12407-201ENSMUST00000180219 324 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Mir6546-201ENSMUST00000184460 62 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm44506-201ENSMUST00000206278 965 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfaip3Q60769 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms