Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Gm45113-201ENSMUST00000207518 165 ntBASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.03□□□□□ -0.48
Trim38Q5SZ99 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim38Q5SZ99 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim38Q5SZ99 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gm16505-201ENSMUST00000179981 232 ntBASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gm7003-201ENSMUST00000195089 312 ntBASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gm18212-201ENSMUST00000211678 889 ntBASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.02□□□□□ -0.49
Trim38Q5SZ99 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim38Q5SZ99 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim38Q5SZ99 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim38Q5SZ99 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim38Q5SZ99 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim38Q5SZ99 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim38Q5SZ99 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim38Q5SZ99 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms