Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Mir704-201ENSMUST00000102106 77 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm12961-201ENSMUST00000120507 1050 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm7589-201ENSMUST00000085631 534 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm6114-201ENSMUST00000182472 968 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm16219-201ENSMUST00000120096 274 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Zfp419-201ENSMUST00000173446 916 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm24466-201ENSMUST00000179978 109 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm44908-201ENSMUST00000208610 266 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm16480-201ENSMUST00000120439 832 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm43965-201ENSMUST00000203779 789 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 AC132881.1-201ENSMUST00000223780 1062 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 AC102327.1-201ENSMUST00000226389 742 ntBASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.12□□□□□ -0.63
Vps13aQ5H8C4 Gm16165-201ENSMUST00000160140 795 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms