Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.79□□□□□ -0.52
Ebf1Q07802 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.78□□□□□ -0.52
Ebf1Q07802 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.78□□□□□ -0.52
Ebf1Q07802 Gm16166-201ENSMUST00000118291 787 ntBASIC11.78□□□□□ -0.52
Ebf1Q07802 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.78□□□□□ -0.52
Ebf1Q07802 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.78□□□□□ -0.52
Ebf1Q07802 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.78□□□□□ -0.52
Ebf1Q07802 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf1Q07802 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.77□□□□□ -0.52
Ebf1Q07802 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Ebf1Q07802 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Ebf1Q07802 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Ebf1Q07802 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.77□□□□□ -0.52
Ebf1Q07802 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.77□□□□□ -0.52
Ebf1Q07802 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.77□□□□□ -0.52
Ebf1Q07802 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.77□□□□□ -0.52
Ebf1Q07802 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ebf1Q07802 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ebf1Q07802 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.77□□□□□ -0.53
Ebf1Q07802 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm3150-201ENSMUST00000166418 204 ntBASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm22877-201ENSMUST00000175451 105 ntBASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ebf1Q07802 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.77□□□□□ -0.53
Ebf1Q07802 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ebf1Q07802 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ebf1Q07802 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms