Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.72□□□□□ -0.85
SgcaP82350 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.72□□□□□ -0.85
SgcaP82350 Gm42937-201ENSMUST00000197360 752 ntBASIC9.72□□□□□ -0.85
SgcaP82350 Gm18711-201ENSMUST00000199341 750 ntBASIC9.72□□□□□ -0.85
SgcaP82350 Gm18584-201ENSMUST00000203098 964 ntBASIC9.72□□□□□ -0.85
SgcaP82350 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.72□□□□□ -0.85
SgcaP82350 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
SgcaP82350 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
SgcaP82350 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.72□□□□□ -0.85
SgcaP82350 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.72□□□□□ -0.85
SgcaP82350 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcaP82350 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.72□□□□□ -0.85
SgcaP82350 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
SgcaP82350 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
SgcaP82350 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
SgcaP82350 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SgcaP82350 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
SgcaP82350 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.71□□□□□ -0.86
SgcaP82350 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Gm14999-201ENSMUST00000121039 624 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Mir1894-201ENSMUST00000122802 81 ntBASIC9.71□□□□□ -0.86
SgcaP82350 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Gm24644-201ENSMUST00000157114 139 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Gm8738-201ENSMUST00000172606 329 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
SgcaP82350 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.71□□□□□ -0.86
SgcaP82350 Gm807-202ENSMUST00000224929 408 ntBASIC9.71□□□□□ -0.86
SgcaP82350 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SgcaP82350 Gm10268-201ENSMUST00000085340 555 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SgcaP82350 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.71□□□□□ -0.86
SgcaP82350 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
SgcaP82350 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
SgcaP82350 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
SgcaP82350 Gm43817-201ENSMUST00000196459 2262 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.71□□□□□ -0.86
SgcaP82350 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SgcaP82350 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcaP82350 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcaP82350 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
SgcaP82350 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.7□□□□□ -0.86
SgcaP82350 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms