Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC18.64■□□□□ 0.57
Cux2P70298 AC102523.1-201ENSMUST00000228706 1144 ntBASIC18.64■□□□□ 0.57
Cux2P70298 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cux2P70298 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cux2P70298 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cux2P70298 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cux2P70298 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cux2P70298 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cux2P70298 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cux2P70298 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Cux2P70298 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cux2P70298 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Cux2P70298 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Cux2P70298 Gm45428-201ENSMUST00000209619 1789 ntBASIC18.63■□□□□ 0.57
Cux2P70298 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cux2P70298 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC18.63■□□□□ 0.57
Cux2P70298 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC18.63■□□□□ 0.57
Cux2P70298 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC18.63■□□□□ 0.57
Cux2P70298 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Gm3527-201ENSMUST00000198905 460 ntBASIC18.63■□□□□ 0.57
Cux2P70298 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Gm18164-201ENSMUST00000213769 927 ntBASIC18.63■□□□□ 0.57
Cux2P70298 Gm18166-201ENSMUST00000215557 927 ntBASIC18.63■□□□□ 0.57
Cux2P70298 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cux2P70298 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cux2P70298 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cux2P70298 AC122273.1-201ENSMUST00000213634 2327 ntBASIC18.63■□□□□ 0.57
Cux2P70298 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cux2P70298 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cux2P70298 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cux2P70298 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cux2P70298 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cux2P70298 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cux2P70298 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cux2P70298 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC18.62■□□□□ 0.57
Cux2P70298 Gm14699-201ENSMUST00000122340 228 ntBASIC18.62■□□□□ 0.57
Cux2P70298 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cux2P70298 Gm26943-201ENSMUST00000182295 957 ntBASIC18.62■□□□□ 0.57
Cux2P70298 BB187690-201ENSMUST00000198619 1176 ntBASIC18.62■□□□□ 0.57
Cux2P70298 AC134793.1-202ENSMUST00000227444 803 ntBASIC18.62■□□□□ 0.57
Cux2P70298 Gm22341-201ENSMUST00000083775 129 ntBASIC18.62■□□□□ 0.57
Cux2P70298 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cux2P70298 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cux2P70298 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cux2P70298 AC151836.1-201ENSMUST00000228730 1637 ntBASIC18.62■□□□□ 0.57
Cux2P70298 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cux2P70298 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cux2P70298 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cux2P70298 Gm43773-201ENSMUST00000198548 2162 ntBASIC18.61■□□□□ 0.57
Cux2P70298 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cux2P70298 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Gm25591-201ENSMUST00000177317 94 ntBASIC18.61■□□□□ 0.57
Cux2P70298 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Gm29164-201ENSMUST00000185454 1024 ntBASIC18.61■□□□□ 0.57
Cux2P70298 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC18.61■□□□□ 0.57
Cux2P70298 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC18.61■□□□□ 0.57
Cux2P70298 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC18.61■□□□□ 0.57
Cux2P70298 AC133496.1-201ENSMUST00000223891 743 ntBASIC18.61■□□□□ 0.57
Cux2P70298 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC18.61■□□□□ 0.57
Cux2P70298 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cux2P70298 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Cux2P70298 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms