Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm10254-201ENSMUST00000052888 867 ntBASIC11.47□□□□□ -0.57
Crnkl1P63154 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.47□□□□□ -0.57
Crnkl1P63154 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crnkl1P63154 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm37489-201ENSMUST00000191883 159 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm10608-202ENSMUST00000213924 676 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.46□□□□□ -0.57
Crnkl1P63154 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.46□□□□□ -0.57
Crnkl1P63154 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Crnkl1P63154 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Crnkl1P63154 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.46□□□□□ -0.58
Crnkl1P63154 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Crnkl1P63154 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.46□□□□□ -0.58
Crnkl1P63154 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Crnkl1P63154 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Crnkl1P63154 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm24830-201ENSMUST00000102024 166 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms