Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm10807-201ENSMUST00000177134 795 ntBASIC10.19□□□□□ -0.78
Lsm6P62313 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Gm8100-201ENSMUST00000182906 988 ntBASIC10.19□□□□□ -0.78
Lsm6P62313 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.19□□□□□ -0.78
Lsm6P62313 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.19□□□□□ -0.78
Lsm6P62313 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.19□□□□□ -0.78
Lsm6P62313 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Lsm6P62313 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm6P62313 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Lsm6P62313 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Lsm6P62313 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Lsm6P62313 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.18□□□□□ -0.78
Lsm6P62313 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.18□□□□□ -0.78
Lsm6P62313 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Lsm6P62313 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Lsm6P62313 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Lsm6P62313 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.18□□□□□ -0.78
Lsm6P62313 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.18□□□□□ -0.78
Lsm6P62313 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.18□□□□□ -0.78
Lsm6P62313 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Lsm6P62313 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Lsm6P62313 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Lsm6P62313 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Gm12266-201ENSMUST00000120311 962 ntBASIC10.18□□□□□ -0.78
Lsm6P62313 Gm14017-201ENSMUST00000121934 386 ntBASIC10.18□□□□□ -0.78
Lsm6P62313 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Gm23085-201ENSMUST00000157849 293 ntBASIC10.18□□□□□ -0.78
Lsm6P62313 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.18□□□□□ -0.78
Lsm6P62313 Gm45186-201ENSMUST00000206874 478 ntBASIC10.18□□□□□ -0.78
Lsm6P62313 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Lsm6P62313 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Lsm6P62313 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm6P62313 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Lsm6P62313 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm6P62313 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Lsm6P62313 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm6P62313 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.17□□□□□ -0.78
Lsm6P62313 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Gm3329-201ENSMUST00000159873 556 ntBASIC10.17□□□□□ -0.78
Lsm6P62313 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms