Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.38□□□□□ -0.43
Usp46P62069 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Usp46P62069 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp46P62069 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.37□□□□□ -0.43
Usp46P62069 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp46P62069 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Gm45832-201ENSMUST00000212762 1443 ntBASIC12.37□□□□□ -0.43
Usp46P62069 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.37□□□□□ -0.43
Usp46P62069 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp46P62069 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp46P62069 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.37□□□□□ -0.43
Usp46P62069 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp46P62069 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp46P62069 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC12.37□□□□□ -0.43
Usp46P62069 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Usp46P62069 Gm6098-201ENSMUST00000180234 330 ntBASIC12.37□□□□□ -0.43
Usp46P62069 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.37□□□□□ -0.43
Usp46P62069 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Usp46P62069 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Gm37835-201ENSMUST00000193305 361 ntBASIC12.37□□□□□ -0.43
Usp46P62069 Gm19287-201ENSMUST00000203190 358 ntBASIC12.37□□□□□ -0.43
Usp46P62069 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC12.37□□□□□ -0.43
Usp46P62069 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp46P62069 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.37□□□□□ -0.43
Usp46P62069 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp46P62069 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.37□□□□□ -0.43
Usp46P62069 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Cog3-203ENSMUST00000227473 4197 ntBASIC12.37□□□□□ -0.43
Usp46P62069 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp46P62069 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp46P62069 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Usp46P62069 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp46P62069 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp46P62069 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Usp46P62069 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Usp46P62069 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Gm12073-201ENSMUST00000117382 524 ntBASIC12.36□□□□□ -0.43
Usp46P62069 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp46P62069 Gm8582-201ENSMUST00000164061 789 ntBASIC12.36□□□□□ -0.43
Usp46P62069 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.36□□□□□ -0.43
Usp46P62069 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC12.36□□□□□ -0.43
Usp46P62069 Gm9136-201ENSMUST00000193368 454 ntBASIC12.36□□□□□ -0.43
Usp46P62069 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp46P62069 Gm6905-201ENSMUST00000205729 511 ntBASIC12.36□□□□□ -0.43
Usp46P62069 Gm45770-201ENSMUST00000212105 616 ntBASIC12.36□□□□□ -0.43
Usp46P62069 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
Usp46P62069 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp46P62069 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms