Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.23□□□□□ -0.77
Sec61a1P61620 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm12036-201ENSMUST00000120008 530 ntBASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm13665-201ENSMUST00000120830 528 ntBASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm44958-201ENSMUST00000203734 736 ntBASIC10.23□□□□□ -0.77
Sec61a1P61620 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gm8420-201ENSMUST00000097103 598 ntBASIC10.23□□□□□ -0.77
Sec61a1P61620 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.23□□□□□ -0.77
Sec61a1P61620 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm14130-201ENSMUST00000118417 987 ntBASIC10.22□□□□□ -0.77
Sec61a1P61620 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.22□□□□□ -0.77
Sec61a1P61620 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.22□□□□□ -0.77
Sec61a1P61620 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm37466-201ENSMUST00000195692 652 ntBASIC10.22□□□□□ -0.77
Sec61a1P61620 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.22□□□□□ -0.77
Sec61a1P61620 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.22□□□□□ -0.77
Sec61a1P61620 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms