Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Sf3b6P59708 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Sf3b6P59708 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sf3b6P59708 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b6P59708 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.3□□□□□ -0.76
Sf3b6P59708 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Gm4986-201ENSMUST00000119731 549 ntBASIC10.3□□□□□ -0.76
Sf3b6P59708 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Gm43179-201ENSMUST00000198797 275 ntBASIC10.3□□□□□ -0.76
Sf3b6P59708 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC10.3□□□□□ -0.76
Sf3b6P59708 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Gm7046-201ENSMUST00000221351 977 ntBASIC10.3□□□□□ -0.76
Sf3b6P59708 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.3□□□□□ -0.76
Sf3b6P59708 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Olfr582-201ENSMUST00000098212 960 ntBASIC10.3□□□□□ -0.76
Sf3b6P59708 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.3□□□□□ -0.76
Sf3b6P59708 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sf3b6P59708 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sf3b6P59708 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm15370-201ENSMUST00000117158 253 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm13297-201ENSMUST00000120205 934 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.29□□□□□ -0.76
Sf3b6P59708 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC10.29□□□□□ -0.76
Sf3b6P59708 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms