Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Mir449b-201ENSMUST00000104833 80 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 Mir1896-201ENSMUST00000122641 81 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gm21854-201ENSMUST00000179901 471 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gm7730-201ENSMUST00000212486 454 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gm5781-201ENSMUST00000219792 443 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 AC156501.1-201ENSMUST00000228219 270 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 AC135114.1-201ENSMUST00000228682 270 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gm13126-201ENSMUST00000117079 3063 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gm43307-201ENSMUST00000199465 2371 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Gm6170-201ENSMUST00000187672 1388 ntBASIC8.99□□□□□ -0.97
Ctdsp1P58466 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ctdsp1P58466 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm5403-201ENSMUST00000117105 2795 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm15467-201ENSMUST00000120582 445 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm11960-201ENSMUST00000122068 925 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm8018-201ENSMUST00000173536 789 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm9522-201ENSMUST00000182394 926 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm43966-201ENSMUST00000203301 612 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Mzt1-203ENSMUST00000227948 952 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm37131-201ENSMUST00000192502 1561 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm42971-201ENSMUST00000199228 2079 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Gm14150-201ENSMUST00000122404 1354 ntBASIC8.98□□□□□ -0.97
Ctdsp1P58466 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC8.98□□□□□ -0.97
Ctdsp1P58466 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm20796-201ENSMUST00000180355 5838 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms