Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Gm26286-201ENSMUST00000104166 134 ntBASIC11.82□□□□□ -0.52
SftpbP50405 Gm11660-201ENSMUST00000120955 412 ntBASIC11.82□□□□□ -0.52
SftpbP50405 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SftpbP50405 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SftpbP50405 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.82□□□□□ -0.52
SftpbP50405 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Gm5705-201ENSMUST00000066241 711 ntBASIC11.82□□□□□ -0.52
SftpbP50405 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SftpbP50405 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.82□□□□□ -0.52
SftpbP50405 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.82□□□□□ -0.52
SftpbP50405 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SftpbP50405 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SftpbP50405 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.81□□□□□ -0.52
SftpbP50405 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.81□□□□□ -0.52
SftpbP50405 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SftpbP50405 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.81□□□□□ -0.52
SftpbP50405 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.81□□□□□ -0.52
SftpbP50405 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.81□□□□□ -0.52
SftpbP50405 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SftpbP50405 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.81□□□□□ -0.52
SftpbP50405 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.81□□□□□ -0.52
SftpbP50405 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SftpbP50405 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SftpbP50405 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.8□□□□□ -0.52
SftpbP50405 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SftpbP50405 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.8□□□□□ -0.52
SftpbP50405 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SftpbP50405 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SftpbP50405 Gm28937-201ENSMUST00000185413 695 ntBASIC11.8□□□□□ -0.52
SftpbP50405 Gm29400-201ENSMUST00000187208 695 ntBASIC11.8□□□□□ -0.52
SftpbP50405 Gm28662-201ENSMUST00000188446 695 ntBASIC11.8□□□□□ -0.52
SftpbP50405 Gm28251-201ENSMUST00000188835 695 ntBASIC11.8□□□□□ -0.52
SftpbP50405 Gm37318-201ENSMUST00000194325 695 ntBASIC11.8□□□□□ -0.52
SftpbP50405 Gm38017-201ENSMUST00000194768 695 ntBASIC11.8□□□□□ -0.52
SftpbP50405 Gm37287-201ENSMUST00000195449 695 ntBASIC11.8□□□□□ -0.52
SftpbP50405 Gm37793-201ENSMUST00000195548 695 ntBASIC11.8□□□□□ -0.52
SftpbP50405 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.8□□□□□ -0.52
SftpbP50405 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SftpbP50405 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms