Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh2P43247 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh2P43247 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh2P43247 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh2P43247 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.95□□□□□ -0.5
Msh2P43247 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh2P43247 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Msh2P43247 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh2P43247 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh2P43247 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.95□□□□□ -0.5
Msh2P43247 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Msh2P43247 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Msh2P43247 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Msh2P43247 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msh2P43247 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msh2P43247 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Msh2P43247 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.94□□□□□ -0.5
Msh2P43247 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.94□□□□□ -0.5
Msh2P43247 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.94□□□□□ -0.5
Msh2P43247 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Msh2P43247 Gm11700-201ENSMUST00000119409 403 ntBASIC11.94□□□□□ -0.5
Msh2P43247 Gm7722-201ENSMUST00000120646 741 ntBASIC11.94□□□□□ -0.5
Msh2P43247 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.94□□□□□ -0.5
Msh2P43247 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.94□□□□□ -0.5
Msh2P43247 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Gm38314-201ENSMUST00000195709 625 ntBASIC11.94□□□□□ -0.5
Msh2P43247 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Gm44262-201ENSMUST00000204969 372 ntBASIC11.94□□□□□ -0.5
Msh2P43247 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.94□□□□□ -0.5
Msh2P43247 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.94□□□□□ -0.5
Msh2P43247 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Msh2P43247 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.94□□□□□ -0.5
Msh2P43247 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh2P43247 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Msh2P43247 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Msh2P43247 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.93□□□□□ -0.5
Msh2P43247 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Msh2P43247 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Msh2P43247 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Msh2P43247 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.93□□□□□ -0.5
Msh2P43247 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.93□□□□□ -0.5
Msh2P43247 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.93□□□□□ -0.5
Msh2P43247 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.93□□□□□ -0.5
Msh2P43247 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Msh2P43247 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.93□□□□□ -0.5
Msh2P43247 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Msh2P43247 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms