Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Gm5174-201ENSMUST00000171131 1423 ntBASIC11.92□□□□□ -0.5
HttP42859 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC11.91□□□□□ -0.5
HttP42859 Gm15664-201ENSMUST00000160167 184 ntBASIC11.91□□□□□ -0.5
HttP42859 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.91□□□□□ -0.5
HttP42859 Gm9578-201ENSMUST00000182354 753 ntBASIC11.91□□□□□ -0.5
HttP42859 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC11.91□□□□□ -0.5
HttP42859 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
HttP42859 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
HttP42859 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.91□□□□□ -0.5
HttP42859 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
HttP42859 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.91□□□□□ -0.5
HttP42859 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.91□□□□□ -0.5
HttP42859 Gm14630-201ENSMUST00000118057 246 ntBASIC11.91□□□□□ -0.5
HttP42859 Gm14650-201ENSMUST00000120400 889 ntBASIC11.91□□□□□ -0.5
HttP42859 Gm21963-201ENSMUST00000179519 330 ntBASIC11.91□□□□□ -0.5
HttP42859 AC151971.6-201ENSMUST00000216193 866 ntBASIC11.91□□□□□ -0.5
HttP42859 Gm18783-201ENSMUST00000220465 1151 ntBASIC11.91□□□□□ -0.5
HttP42859 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC11.91□□□□□ -0.5
HttP42859 AC114585.2-201ENSMUST00000227693 486 ntBASIC11.91□□□□□ -0.5
HttP42859 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC11.91□□□□□ -0.5
HttP42859 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.91□□□□□ -0.5
HttP42859 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
HttP42859 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC11.91□□□□□ -0.5
HttP42859 Gm6686-201ENSMUST00000178455 258 ntBASIC11.91□□□□□ -0.5
HttP42859 Gm5205-201ENSMUST00000182253 1003 ntBASIC11.91□□□□□ -0.5
HttP42859 Gm9771-201ENSMUST00000198267 1137 ntBASIC11.91□□□□□ -0.5
HttP42859 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.91□□□□□ -0.5
HttP42859 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HttP42859 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.9□□□□□ -0.5
HttP42859 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Gm11380-201ENSMUST00000118067 560 ntBASIC11.9□□□□□ -0.5
HttP42859 Gm15793-201ENSMUST00000121857 495 ntBASIC11.9□□□□□ -0.5
HttP42859 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC11.9□□□□□ -0.5
HttP42859 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.9□□□□□ -0.5
HttP42859 Gm5873-201ENSMUST00000177157 1066 ntBASIC11.9□□□□□ -0.5
HttP42859 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
HttP42859 Gm18299-201ENSMUST00000192026 636 ntBASIC11.9□□□□□ -0.5
HttP42859 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC11.9□□□□□ -0.5
HttP42859 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC11.9□□□□□ -0.5
HttP42859 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC11.9□□□□□ -0.5
HttP42859 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
HttP42859 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Gm5311-201ENSMUST00000203518 709 ntBASIC11.9□□□□□ -0.5
HttP42859 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC11.9□□□□□ -0.5
HttP42859 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC11.9□□□□□ -0.5
HttP42859 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.9□□□□□ -0.5
HttP42859 Gm3379-201ENSMUST00000222259 642 ntBASIC11.9□□□□□ -0.5
HttP42859 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.9□□□□□ -0.5
HttP42859 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HttP42859 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
HttP42859 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
HttP42859 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms