Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Gm8707-201ENSMUST00000183325 980 ntBASIC14.96□□□□□ -0.01
Col18a1P39061 Gm37944-201ENSMUST00000194233 414 ntBASIC14.96□□□□□ -0.01
Col18a1P39061 Gm8557-201ENSMUST00000220777 475 ntBASIC14.96□□□□□ -0.01
Col18a1P39061 CT571271.1-201ENSMUST00000227071 670 ntBASIC14.96□□□□□ -0.01
Col18a1P39061 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Col18a1P39061 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC14.96□□□□□ -0.01
Col18a1P39061 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Col18a1P39061 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col18a1P39061 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Col18a1P39061 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Col18a1P39061 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col18a1P39061 AC158777.1-201ENSMUST00000226216 1724 ntBASIC14.96□□□□□ -0.02
Col18a1P39061 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col18a1P39061 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col18a1P39061 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col18a1P39061 Gm8824-201ENSMUST00000182962 990 ntBASIC14.96□□□□□ -0.02
Col18a1P39061 Gm38038-201ENSMUST00000193803 259 ntBASIC14.96□□□□□ -0.02
Col18a1P39061 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC14.96□□□□□ -0.02
Col18a1P39061 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC14.96□□□□□ -0.02
Col18a1P39061 Gm45308-201ENSMUST00000210610 415 ntBASIC14.96□□□□□ -0.02
Col18a1P39061 AC123061.1-201ENSMUST00000228021 999 ntBASIC14.96□□□□□ -0.02
Col18a1P39061 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col18a1P39061 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col18a1P39061 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col18a1P39061 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.95□□□□□ -0.02
Col18a1P39061 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col18a1P39061 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Col18a1P39061 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC14.95□□□□□ -0.02
Col18a1P39061 H2afy3-201ENSMUST00000151919 1112 ntBASIC14.95□□□□□ -0.02
Col18a1P39061 Gm22662-201ENSMUST00000175290 256 ntBASIC14.95□□□□□ -0.02
Col18a1P39061 Gm5873-201ENSMUST00000177157 1066 ntBASIC14.95□□□□□ -0.02
Col18a1P39061 Gm17799-201ENSMUST00000183270 667 ntBASIC14.95□□□□□ -0.02
Col18a1P39061 Gm2328-201ENSMUST00000193525 535 ntBASIC14.95□□□□□ -0.02
Col18a1P39061 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC14.95□□□□□ -0.02
Col18a1P39061 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col18a1P39061 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.95□□□□□ -0.02
Col18a1P39061 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col18a1P39061 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.94□□□□□ -0.02
Col18a1P39061 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col18a1P39061 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.94□□□□□ -0.02
Col18a1P39061 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Gm12950-201ENSMUST00000121683 417 ntBASIC14.94□□□□□ -0.02
Col18a1P39061 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC14.94□□□□□ -0.02
Col18a1P39061 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col18a1P39061 Gm20474-201ENSMUST00000180089 596 ntBASIC14.94□□□□□ -0.02
Col18a1P39061 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Gm10617-201ENSMUST00000098368 1172 ntBASIC14.94□□□□□ -0.02
Col18a1P39061 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col18a1P39061 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Gm13456-201ENSMUST00000118928 1365 ntBASIC14.94□□□□□ -0.02
Col18a1P39061 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Col18a1P39061 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col18a1P39061 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col18a1P39061 Gm23129-201ENSMUST00000104259 132 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 Gm12254-201ENSMUST00000134617 471 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC14.93□□□□□ -0.02
Col18a1P39061 Gm5274-201ENSMUST00000182641 1003 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC14.93□□□□□ -0.02
Col18a1P39061 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms