Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm18753-201ENSMUST00000201000 566 ntBASIC10.75□□□□□ -0.69
Cd40lgP27548 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Gm5705-201ENSMUST00000066241 711 ntBASIC10.75□□□□□ -0.69
Cd40lgP27548 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.75□□□□□ -0.69
Cd40lgP27548 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.75□□□□□ -0.69
Cd40lgP27548 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.75□□□□□ -0.69
Cd40lgP27548 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Cd40lgP27548 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd40lgP27548 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Cd40lgP27548 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cd40lgP27548 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.74□□□□□ -0.69
Cd40lgP27548 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Gm26286-201ENSMUST00000104166 134 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Gm24891-201ENSMUST00000104391 136 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cd40lgP27548 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.74□□□□□ -0.69
Cd40lgP27548 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.74□□□□□ -0.69
Cd40lgP27548 Gm28686-201ENSMUST00000187404 609 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Gm18827-201ENSMUST00000188341 790 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Gm43378-201ENSMUST00000199336 582 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Gm42599-201ENSMUST00000201308 469 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cd40lgP27548 Gm21811-201ENSMUST00000096485 930 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.74□□□□□ -0.69
Cd40lgP27548 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Btrc-209ENSMUST00000224478 2194 ntBASIC10.74□□□□□ -0.69
Cd40lgP27548 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cd40lgP27548 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd40lgP27548 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cd40lgP27548 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Cd40lgP27548 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Cd40lgP27548 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cd40lgP27548 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Gm23596-201ENSMUST00000104304 132 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Gm12196-201ENSMUST00000120954 262 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 Gm26461-201ENSMUST00000175064 290 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 Mir5132-201ENSMUST00000175166 71 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cd40lgP27548 Gm37666-201ENSMUST00000194110 866 ntBASIC10.73□□□□□ -0.69
Cd40lgP27548 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms