Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.95□□□□□ -0.5
Nfkb1P25799 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.95□□□□□ -0.5
Nfkb1P25799 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nfkb1P25799 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.95□□□□□ -0.5
Nfkb1P25799 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nfkb1P25799 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.95□□□□□ -0.5
Nfkb1P25799 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nfkb1P25799 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.94□□□□□ -0.5
Nfkb1P25799 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.94□□□□□ -0.5
Nfkb1P25799 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.94□□□□□ -0.5
Nfkb1P25799 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.94□□□□□ -0.5
Nfkb1P25799 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.94□□□□□ -0.5
Nfkb1P25799 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.94□□□□□ -0.5
Nfkb1P25799 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.94□□□□□ -0.5
Nfkb1P25799 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.94□□□□□ -0.5
Nfkb1P25799 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.94□□□□□ -0.5
Nfkb1P25799 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nfkb1P25799 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.94□□□□□ -0.5
Nfkb1P25799 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.93□□□□□ -0.5
Nfkb1P25799 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Nfkb1P25799 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.93□□□□□ -0.5
Nfkb1P25799 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Gm12899-201ENSMUST00000120565 551 ntBASIC11.93□□□□□ -0.5
Nfkb1P25799 Gm9089-201ENSMUST00000122027 526 ntBASIC11.93□□□□□ -0.5
Nfkb1P25799 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.93□□□□□ -0.5
Nfkb1P25799 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Nfkb1P25799 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.93□□□□□ -0.5
Nfkb1P25799 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.93□□□□□ -0.5
Nfkb1P25799 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nfkb1P25799 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.93□□□□□ -0.5
Nfkb1P25799 Gm2875-201ENSMUST00000211333 360 ntBASIC11.93□□□□□ -0.5
Nfkb1P25799 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nfkb1P25799 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nfkb1P25799 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.93□□□□□ -0.5
Nfkb1P25799 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Nfkb1P25799 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nfkb1P25799 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms