Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pde6bP23440 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pde6bP23440 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Gm3150-201ENSMUST00000166418 204 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Pde6bP23440 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 Gm17877-201ENSMUST00000192578 814 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 Gm43520-201ENSMUST00000197996 164 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 Gm6450-201ENSMUST00000200896 574 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 Gm44124-201ENSMUST00000204159 472 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pde6bP23440 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pde6bP23440 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.72□□□□□ -0.37
Pde6bP23440 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Pde6bP23440 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pde6bP23440 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Pde6bP23440 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6bP23440 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.71□□□□□ -0.37
Pde6bP23440 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pde6bP23440 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pde6bP23440 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
Pde6bP23440 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pde6bP23440 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Gm11783-201ENSMUST00000119549 885 ntBASIC12.71□□□□□ -0.37
Pde6bP23440 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.71□□□□□ -0.37
Pde6bP23440 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Gm22442-201ENSMUST00000157256 144 ntBASIC12.71□□□□□ -0.37
Pde6bP23440 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.71□□□□□ -0.37
Pde6bP23440 Gm8492-201ENSMUST00000182375 987 ntBASIC12.71□□□□□ -0.37
Pde6bP23440 Mir6998-201ENSMUST00000183343 64 ntBASIC12.71□□□□□ -0.37
Pde6bP23440 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.71□□□□□ -0.37
Pde6bP23440 Gm21156-201ENSMUST00000189693 869 ntBASIC12.71□□□□□ -0.37
Pde6bP23440 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.71□□□□□ -0.37
Pde6bP23440 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.71□□□□□ -0.37
Pde6bP23440 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.71□□□□□ -0.37
Pde6bP23440 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6bP23440 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6bP23440 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6bP23440 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6bP23440 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6bP23440 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6bP23440 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pde6bP23440 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6bP23440 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pde6bP23440 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms