Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VimP20152 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VimP20152 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.71□□□□□ -0.54
VimP20152 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.71□□□□□ -0.54
VimP20152 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
VimP20152 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VimP20152 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VimP20152 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VimP20152 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
VimP20152 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
VimP20152 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
VimP20152 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
VimP20152 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
VimP20152 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
VimP20152 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.7□□□□□ -0.54
VimP20152 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.7□□□□□ -0.54
VimP20152 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
VimP20152 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.7□□□□□ -0.54
VimP20152 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.7□□□□□ -0.54
VimP20152 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
VimP20152 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.7□□□□□ -0.54
VimP20152 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.7□□□□□ -0.54
VimP20152 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.7□□□□□ -0.54
VimP20152 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.7□□□□□ -0.54
VimP20152 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
VimP20152 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.7□□□□□ -0.54
VimP20152 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.7□□□□□ -0.54
VimP20152 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.7□□□□□ -0.54
VimP20152 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
VimP20152 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
VimP20152 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VimP20152 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.7□□□□□ -0.54
VimP20152 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.69□□□□□ -0.54
VimP20152 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.69□□□□□ -0.54
VimP20152 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.69□□□□□ -0.54
VimP20152 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VimP20152 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VimP20152 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VimP20152 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
VimP20152 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.69□□□□□ -0.54
VimP20152 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VimP20152 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VimP20152 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
VimP20152 Gm37935-201ENSMUST00000192012 982 ntBASIC11.69□□□□□ -0.54
VimP20152 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.69□□□□□ -0.54
VimP20152 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VimP20152 Gm7287-201ENSMUST00000205267 602 ntBASIC11.69□□□□□ -0.54
VimP20152 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
VimP20152 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VimP20152 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms