Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vti1aO89116 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.55□□□□□ -0.4
Vti1aO89116 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Gm12579-201ENSMUST00000118040 783 ntBASIC12.54□□□□□ -0.4
Vti1aO89116 Gm8731-201ENSMUST00000118088 412 ntBASIC12.54□□□□□ -0.4
Vti1aO89116 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.54□□□□□ -0.4
Vti1aO89116 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.54□□□□□ -0.4
Vti1aO89116 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.54□□□□□ -0.4
Vti1aO89116 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vti1aO89116 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.54□□□□□ -0.4
Vti1aO89116 Gm2875-201ENSMUST00000211333 360 ntBASIC12.54□□□□□ -0.4
Vti1aO89116 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.54□□□□□ -0.4
Vti1aO89116 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.54□□□□□ -0.4
Vti1aO89116 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
Vti1aO89116 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Vti1aO89116 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vti1aO89116 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vti1aO89116 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.54□□□□□ -0.4
Vti1aO89116 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vti1aO89116 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.53□□□□□ -0.4
Vti1aO89116 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.53□□□□□ -0.4
Vti1aO89116 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.53□□□□□ -0.4
Vti1aO89116 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Vti1aO89116 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.53□□□□□ -0.4
Vti1aO89116 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.53□□□□□ -0.4
Vti1aO89116 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.53□□□□□ -0.4
Vti1aO89116 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.53□□□□□ -0.4
Vti1aO89116 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Vti1aO89116 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Gm23153-201ENSMUST00000175323 313 ntBASIC12.53□□□□□ -0.4
Vti1aO89116 Gm4310-201ENSMUST00000177847 889 ntBASIC12.53□□□□□ -0.4
Vti1aO89116 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Gm8492-201ENSMUST00000182375 987 ntBASIC12.53□□□□□ -0.4
Vti1aO89116 Gm7593-201ENSMUST00000187246 644 ntBASIC12.53□□□□□ -0.4
Vti1aO89116 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Gm17877-201ENSMUST00000192578 814 ntBASIC12.53□□□□□ -0.4
Vti1aO89116 Gm5714-201ENSMUST00000197343 566 ntBASIC12.53□□□□□ -0.4
Vti1aO89116 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.53□□□□□ -0.4
Vti1aO89116 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.53□□□□□ -0.4
Vti1aO89116 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vti1aO89116 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vti1aO89116 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.53□□□□□ -0.4
Vti1aO89116 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vti1aO89116 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vti1aO89116 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vti1aO89116 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms