Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hcn1O88704 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.13□□□□□ -0.63
Hcn1O88704 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.13□□□□□ -0.63
Hcn1O88704 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.13□□□□□ -0.63
Hcn1O88704 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hcn1O88704 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hcn1O88704 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.13□□□□□ -0.63
Hcn1O88704 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.13□□□□□ -0.63
Hcn1O88704 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.13□□□□□ -0.63
Hcn1O88704 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hcn1O88704 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Hcn1O88704 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Hcn1O88704 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.12□□□□□ -0.63
Hcn1O88704 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Gm23949-201ENSMUST00000104027 127 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Gm12217-201ENSMUST00000118858 696 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Gm15711-201ENSMUST00000118889 535 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.12□□□□□ -0.63
Hcn1O88704 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Hcn1O88704 Gm28071-201ENSMUST00000190355 478 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Gm4607-201ENSMUST00000206649 577 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.12□□□□□ -0.63
Hcn1O88704 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.12□□□□□ -0.63
Hcn1O88704 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Hcn1O88704 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Hcn1O88704 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hcn1O88704 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hcn1O88704 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcn1O88704 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.12□□□□□ -0.63
Hcn1O88704 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.11□□□□□ -0.63
Hcn1O88704 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Hcn1O88704 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hcn1O88704 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Hcn1O88704 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.11□□□□□ -0.63
Hcn1O88704 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.11□□□□□ -0.63
Hcn1O88704 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.11□□□□□ -0.63
Hcn1O88704 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Hcn1O88704 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.11□□□□□ -0.63
Hcn1O88704 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Mir6927-201ENSMUST00000184494 71 ntBASIC11.11□□□□□ -0.63
Hcn1O88704 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.11□□□□□ -0.63
Hcn1O88704 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.11□□□□□ -0.63
Hcn1O88704 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.11□□□□□ -0.63
Hcn1O88704 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hcn1O88704 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hcn1O88704 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Hcn1O88704 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.11□□□□□ -0.63
Hcn1O88704 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hcn1O88704 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.11□□□□□ -0.63
Hcn1O88704 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.11□□□□□ -0.63
Hcn1O88704 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hcn1O88704 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hcn1O88704 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcn1O88704 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Hcn1O88704 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms