Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm2875-201ENSMUST00000211333 360 ntBASIC12.55□□□□□ -0.4
Per1O35973 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.55□□□□□ -0.4
Per1O35973 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Per1O35973 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.55□□□□□ -0.4
Per1O35973 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Per1O35973 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Per1O35973 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Per1O35973 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Per1O35973 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Per1O35973 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.55□□□□□ -0.4
Per1O35973 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Per1O35973 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.55□□□□□ -0.4
Per1O35973 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.54□□□□□ -0.4
Per1O35973 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.54□□□□□ -0.4
Per1O35973 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.54□□□□□ -0.4
Per1O35973 Gm12208-201ENSMUST00000122004 163 ntBASIC12.54□□□□□ -0.4
Per1O35973 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.54□□□□□ -0.4
Per1O35973 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.54□□□□□ -0.4
Per1O35973 Gm28388-201ENSMUST00000186262 437 ntBASIC12.54□□□□□ -0.4
Per1O35973 Gm8365-201ENSMUST00000197334 648 ntBASIC12.54□□□□□ -0.4
Per1O35973 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.54□□□□□ -0.4
Per1O35973 Gm44158-201ENSMUST00000203881 505 ntBASIC12.54□□□□□ -0.4
Per1O35973 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.54□□□□□ -0.4
Per1O35973 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Per1O35973 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Per1O35973 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Per1O35973 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.54□□□□□ -0.4
Per1O35973 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Per1O35973 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Per1O35973 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Per1O35973 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Per1O35973 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Per1O35973 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Per1O35973 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Per1O35973 Gm8111-201ENSMUST00000117659 987 ntBASIC12.53□□□□□ -0.4
Per1O35973 Gm13422-201ENSMUST00000118834 504 ntBASIC12.53□□□□□ -0.4
Per1O35973 Gm15617-201ENSMUST00000118973 771 ntBASIC12.53□□□□□ -0.4
Per1O35973 Gm12899-201ENSMUST00000120565 551 ntBASIC12.53□□□□□ -0.4
Per1O35973 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Per1O35973 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.53□□□□□ -0.4
Per1O35973 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.53□□□□□ -0.4
Per1O35973 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.53□□□□□ -0.4
Per1O35973 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.53□□□□□ -0.4
Per1O35973 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.53□□□□□ -0.4
Per1O35973 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.53□□□□□ -0.4
Per1O35973 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.53□□□□□ -0.4
Per1O35973 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Per1O35973 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Per1O35973 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms