Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Gm5641-201ENSMUST00000091130 1488 ntBASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-1G3UXB3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm11989-201ENSMUST00000117240 672 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm13351-201ENSMUST00000118087 414 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm15352-201ENSMUST00000118696 270 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm11362-201ENSMUST00000118838 850 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm20909-202ENSMUST00000181205 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm20747-202ENSMUST00000187856 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm17796-201ENSMUST00000189015 1213 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm3912-203ENSMUST00000211024 367 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 AC154692.1-202ENSMUST00000226632 1231 ntBASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Olfr1234-201ENSMUST00000099783 945 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Upp2-203ENSMUST00000102755 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx1-1G3UXB3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Gm13566-201ENSMUST00000117428 1142 ntBASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Gm20637-201ENSMUST00000175715 462 ntBASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Gm26991-201ENSMUST00000180950 620 ntBASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Gm28404-201ENSMUST00000190242 453 ntBASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Gm45310-201ENSMUST00000210436 275 ntBASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Rnf212b-201ENSMUST00000218311 1201 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.22□□□□□ -0.13
Nkx1-1G3UXB3 AC123692.1-201ENSMUST00000227514 730 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms