Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm10608-202ENSMUST00000213924 676 ntBASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gm6991-201ENSMUST00000218475 1178 ntBASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gm7046-201ENSMUST00000221351 977 ntBASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm13392-201ENSMUST00000117708 150 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm13297-201ENSMUST00000120205 934 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm13786-201ENSMUST00000122371 333 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm43438-201ENSMUST00000198133 379 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm18935-201ENSMUST00000212692 664 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm9823-201ENSMUST00000051212 327 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm10312-201ENSMUST00000078515 489 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh1F7BJK1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms