Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm14993-201ENSMUST00000121180 164 ntBASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm23675-201ENSMUST00000157311 125 ntBASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm26976-201ENSMUST00000182929 908 ntBASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm43671-201ENSMUST00000200422 433 ntBASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm7082-201ENSMUST00000209880 969 ntBASIC10.41□□□□□ -0.74
Shank1D3YZU1 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm10263-201ENSMUST00000085163 300 ntBASIC10.41□□□□□ -0.74
Shank1D3YZU1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Matn2-203ENSMUST00000226766 3252 ntBASIC10.4□□□□□ -0.74
Shank1D3YZU1 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Gm24809-201ENSMUST00000175318 271 ntBASIC10.4□□□□□ -0.74
Shank1D3YZU1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Gm8197-202ENSMUST00000193422 934 ntBASIC10.4□□□□□ -0.74
Shank1D3YZU1 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.4□□□□□ -0.74
Shank1D3YZU1 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.4□□□□□ -0.74
Shank1D3YZU1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Shank1D3YZU1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.4□□□□□ -0.75
Shank1D3YZU1 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.4□□□□□ -0.75
Shank1D3YZU1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Shank1D3YZU1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Gm11560-201ENSMUST00000117567 948 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 Gm43854-201ENSMUST00000200418 394 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Trav11n-201ENSMUST00000200113 343 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 Gm7238-201ENSMUST00000206467 973 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms