Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Gm6091-201ENSMUST00000098307 165 ntBASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
Gm12887B1AVM1 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Gm12887B1AVM1 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
Gm12887B1AVM1 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Gm27839-201ENSMUST00000184242 106 ntBASIC9.33□□□□□ -0.92
Gm12887B1AVM1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm12887B1AVM1 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm12887B1AVM1 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms