Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chd3B1AR17 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm14585-201ENSMUST00000120713 634 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm12030-201ENSMUST00000121917 223 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm26047-201ENSMUST00000157308 113 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm37826-201ENSMUST00000195329 322 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm26047-202ENSMUST00000198840 115 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm3619-201ENSMUST00000219947 775 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm19009-201ENSMUST00000223072 823 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chd3B1AR17 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.35□□□□□ -0.59
Chd3B1AR17 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm8492-201ENSMUST00000182375 987 ntBASIC11.34□□□□□ -0.59
Chd3B1AR17 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm42518-201ENSMUST00000196277 938 ntBASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm30946-201ENSMUST00000198288 724 ntBASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm43852-201ENSMUST00000202098 917 ntBASIC11.34□□□□□ -0.59
Chd3B1AR17 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd3B1AR17 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.34□□□□□ -0.59
Chd3B1AR17 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Chd3B1AR17 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd3B1AR17 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.59
Chd3B1AR17 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chd3B1AR17 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chd3B1AR17 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.33□□□□□ -0.6
Chd3B1AR17 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.33□□□□□ -0.6
Chd3B1AR17 Olfml3-204ENSMUST00000169286 874 ntBASIC11.33□□□□□ -0.6
Chd3B1AR17 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.33□□□□□ -0.6
Chd3B1AR17 Gm17825-201ENSMUST00000206836 794 ntBASIC11.33□□□□□ -0.6
Chd3B1AR17 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.33□□□□□ -0.6
Chd3B1AR17 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chd3B1AR17 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd3B1AR17 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Chd3B1AR17 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd3B1AR17 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms