Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm15476-201ENSMUST00000118247 1191 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm14760-201ENSMUST00000121831 999 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm8960-201ENSMUST00000219787 788 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm26119-201ENSMUST00000175601 104 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Chd6A3KFM7 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm7790-201ENSMUST00000118716 1310 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Paupar-201ENSMUST00000194826 3482 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm7061-201ENSMUST00000118127 1416 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Pea15b-202ENSMUST00000183185 555 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm19918-201ENSMUST00000194858 400 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm24146-201ENSMUST00000082760 321 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm16410-201ENSMUST00000094550 774 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm12481-201ENSMUST00000102482 297 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm5706-201ENSMUST00000181525 993 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm6317-201ENSMUST00000183159 1000 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms