Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Mir877-201ENSMUST00000104738 85 ntBASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Gm12036-201ENSMUST00000120008 530 ntBASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Gm44967-201ENSMUST00000207047 631 ntBASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RpgrQ9R0X5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
RpgrQ9R0X5 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Gm11511-201ENSMUST00000118146 540 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Gm17376-201ENSMUST00000166016 84 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.83□□□□□ -0.52
RpgrQ9R0X5 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RpgrQ9R0X5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RpgrQ9R0X5 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RpgrQ9R0X5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RpgrQ9R0X5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
RpgrQ9R0X5 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RpgrQ9R0X5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.82□□□□□ -0.52
RpgrQ9R0X5 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RpgrQ9R0X5 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.82□□□□□ -0.52
RpgrQ9R0X5 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms