Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm44069-201ENSMUST00000204898 506 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm10175-201ENSMUST00000086013 645 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Erich3-203ENSMUST00000189969 3460 ntBASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm14494-201ENSMUST00000118786 435 ntBASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm15467-201ENSMUST00000120582 445 ntBASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Smco4Q9JIS3 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.21□□□□□ -0.93
Smco4Q9JIS3 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Gm4875-201ENSMUST00000118257 786 ntBASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Gm14704-201ENSMUST00000120300 874 ntBASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Gm16296-201ENSMUST00000159905 325 ntBASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.21□□□□□ -0.94
Smco4Q9JIS3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms