Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Gm12389-201ENSMUST00000117696 418 ntBASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Gm4462-201ENSMUST00000166453 492 ntBASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.9□□□□□ -0.51
Nkx2-4Q9EQM3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx2-4Q9EQM3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.9□□□□□ -0.51
Nkx2-4Q9EQM3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.51
Nkx2-4Q9EQM3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx2-4Q9EQM3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm22937-201ENSMUST00000103954 131 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm13286-201ENSMUST00000117750 537 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm11475-201ENSMUST00000118482 476 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm5395-201ENSMUST00000121650 915 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm14441-201ENSMUST00000121960 540 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm24943-201ENSMUST00000158329 433 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm7627-201ENSMUST00000183205 999 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-4Q9EQM3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gm23769-201ENSMUST00000104441 121 ntBASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gm15136-201ENSMUST00000120552 533 ntBASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gm25569-201ENSMUST00000157175 131 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms