Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Hmgn3Q9DCB1 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Gm11478-201ENSMUST00000117851 599 ntBASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Gm5419-201ENSMUST00000119301 527 ntBASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Gm26927-201ENSMUST00000182385 965 ntBASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Gm29649-201ENSMUST00000185649 419 ntBASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Gm18187-201ENSMUST00000196476 984 ntBASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Gm7653-201ENSMUST00000214567 508 ntBASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn3Q9DCB1 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gm11573-201ENSMUST00000119956 394 ntBASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gm27023-201ENSMUST00000182372 285 ntBASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms