Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Gm12091-201ENSMUST00000146791 830 ntBASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Mir7023-201ENSMUST00000185093 64 ntBASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.67□□□□□ -0.54
Sf3a3Q9D554 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gm14247-201ENSMUST00000120950 237 ntBASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gm4271-201ENSMUST00000174444 973 ntBASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gm10012-201ENSMUST00000078252 192 ntBASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Sf3a3Q9D554 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms