Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 AC172027.1-201ENSMUST00000217659 337 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm23949-201ENSMUST00000104027 127 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm9164-201ENSMUST00000118700 1014 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm15711-201ENSMUST00000118889 535 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm12997-201ENSMUST00000120207 640 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm13366-201ENSMUST00000122198 970 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm29199-201ENSMUST00000187766 775 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm28071-201ENSMUST00000190355 478 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm4157-201ENSMUST00000211647 679 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 CT025552.1-201ENSMUST00000224561 521 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.63□□□□□ -0.55
Trim33Q99PP7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim33Q99PP7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms