Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Erich3-203ENSMUST00000189969 3460 ntBASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.27□□□□□ -0.6
Rnf111Q99ML9 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf111Q99ML9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf111Q99ML9 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Rnf111Q99ML9 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf111Q99ML9 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.27□□□□□ -0.6
Rnf111Q99ML9 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf111Q99ML9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Rnf111Q99ML9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf111Q99ML9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf111Q99ML9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gm5419-201ENSMUST00000119301 527 ntBASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.27□□□□□ -0.61
Rnf111Q99ML9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf111Q99ML9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Gm26361-201ENSMUST00000158868 186 ntBASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Gm38314-201ENSMUST00000195709 625 ntBASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.26□□□□□ -0.61
Rnf111Q99ML9 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf111Q99ML9 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms