Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx6-1Q99MA9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm25053-201ENSMUST00000103982 133 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm22594-201ENSMUST00000104251 130 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm25922-201ENSMUST00000104281 130 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm24679-201ENSMUST00000158762 111 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm18801-201ENSMUST00000186616 536 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm25053-202ENSMUST00000199731 132 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.95□□□□□ -0.66
Nkx6-1Q99MA9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm23958-201ENSMUST00000157207 105 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm17192-201ENSMUST00000169031 511 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm9081-201ENSMUST00000182346 991 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm18776-201ENSMUST00000188833 654 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm43163-201ENSMUST00000196571 442 ntBASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx6-1Q99MA9 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms