Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm25063-201ENSMUST00000104666 94 ntBASIC10.22□□□□□ -0.77
Scrt1Q99M85 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm12948-201ENSMUST00000119406 682 ntBASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm22442-201ENSMUST00000157256 144 ntBASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm37458-201ENSMUST00000194055 410 ntBASIC10.22□□□□□ -0.77
Scrt1Q99M85 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm5705-201ENSMUST00000066241 711 ntBASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.22□□□□□ -0.77
Scrt1Q99M85 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.22□□□□□ -0.77
Scrt1Q99M85 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Scrt1Q99M85 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.21□□□□□ -0.77
Scrt1Q99M85 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Gm14219-201ENSMUST00000120414 288 ntBASIC10.21□□□□□ -0.77
Scrt1Q99M85 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Gm24398-201ENSMUST00000157870 109 ntBASIC10.21□□□□□ -0.77
Scrt1Q99M85 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.21□□□□□ -0.77
Scrt1Q99M85 Gm9630-201ENSMUST00000178304 885 ntBASIC10.21□□□□□ -0.77
Scrt1Q99M85 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.21□□□□□ -0.77
Scrt1Q99M85 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.21□□□□□ -0.77
Scrt1Q99M85 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.21□□□□□ -0.77
Scrt1Q99M85 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.21□□□□□ -0.77
Scrt1Q99M85 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Gm26035-201ENSMUST00000083065 308 ntBASIC10.21□□□□□ -0.77
Scrt1Q99M85 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Scrt1Q99M85 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms