Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Gm45865-201ENSMUST00000211815 945 ntBASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm10110-202ENSMUST00000228705 3220 ntBASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm22133-201ENSMUST00000102082 109 ntBASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm7895-201ENSMUST00000187459 1173 ntBASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm42629-201ENSMUST00000199063 1102 ntBASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Rps4l-202ENSMUST00000204242 789 ntBASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 AC159205.5-202ENSMUST00000224849 386 ntBASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdk5rap3Q99LM2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms